Publications

2014
Fernandez IS, Akhondi-Asl A, Klehm J, Warfield S, Peters J, Loddenkemper T. Patients with Electrical Status Epilepticus in Sleep and Normal Magnetic Resonance Imaging Have Smaller Thalamic Volume Than Controls (P7. 332). Neurology. 2014;82 (10 Supplement) :P7–332.
Akhondi-Asl A, Afacan O, Mulkern RV, Warfield SK. T 2-Relaxometry for Myelin Water Fraction Extraction Using Wald Distribution and Extended Phase Graph, in International Conference on Medical Image Computing and Computer-Assisted Intervention. Springer, Cham ; 2014 :145–152.
Siversson C, Akhondi-Asl A, Bixby S, Kim Y-J, Warfield SK. Three-dimensional hip cartilage quality assessment of morphology and dGEMRIC by planar maps and automated segmentation. Osteoarthritis and cartilage. 2014;22 (10) :1511–1515.
2013
Scherrer B, Schwartzman A, Taquet M, Prabhu SP, Sahin M, Akhondi-Asl A, Warfield SK. Characterizing the distribution of anisotropic micro-structural environments with diffusion-weighted imaging (DIAMOND), in International Conference on Medical Image Computing and Computer-Assisted Intervention. Springer, Berlin, Heidelberg ; 2013 :518–526.
Scherrer B, Schwartzman A, Taquet M, Prabhu SP, Sahin M, Akhondi-Asl A, Warfield SK. Medical Image Computing and Computer-Assisted Intervention–MICCAI 2013. 2013.
Asman A, Akhondi-Asl A, Wang H, Tustison N, Avants B, Warfield SK, Landman B. Miccai 2013 segmentation algorithms, theory and applications (SATA) challenge results summary, in MICCAI Challenge Workshop on Segmentation: Algorithms, Theory and Applications (SATA). ; 2013.
Akhondi-Asl A, Warfield SK. Simultaneous truth and performance level estimation through fusion of probabilistic segmentations. Medical Imaging, IEEE Transactions on. 2013;32 (10) :1840–1852.
2012
Commowick O, Akhondi-Asl A, Warfield SK. Estimating a reference standard segmentation with spatially varying performance parameters: local MAP STAPLE. IEEE transactions on medical imaging. 2012;31 (8) :1593–1606.
Akhondi-Asl A, Warfield SK. Estimation of the prior distribution of ground truth in the STAPLE algorithm: an empirical bayesian approach, in International Conference on Medical Image Computing and Computer-Assisted Intervention. Springer, Berlin, Heidelberg ; 2012 :593–600.
Gholipour A, Akhondi-Asl A, Estroff JA, Warfield SK. Multi-atlas multi-shape segmentation of fetal brain MRI for volumetric and morphometric analysis of ventriculomegaly. NeuroImage. 2012;60 (3) :1819–1831.
Akhondi-Asl A, Hans A, Scherrer B, Peters JM, Warfield SK. Whole brain group network analysis using network bias and variance parameters, in Biomedical Imaging (ISBI), 2012 9th IEEE International Symposium on. IEEE ; 2012 :1511–1514.
2011
Akhondi-Asl A, Warfield SK. Cortical brain structures segmentation using constrained optimization and intensity coupling, in Biomedical Imaging: From Nano to Macro, 2011 IEEE International Symposium on. IEEE ; 2011 :2022–2025.
Akhondi-Asl A, Jafari-Khouzani K, Elisevich K, Soltanian-Zadeh H. Hippocampal volumetry for lateralization of temporal lobe epilepsy: Automated versus manual methods. Neuroimage. 2011;54 :S218–S226.
Akhondi-Asl A, Warfield SK. A Tutorial Introduction to STAPLE. Crl. med. harvard. edu. 2011.
2010
Akhondi-Asl A, Jafari-Khouzani K, Soltanian-Zadeh H. Multiple-atlas-based automatic sementation of hippocampus for lateralization in temporal lobe epilepsy, in Biomedical Imaging: From Nano to Macro, 2010 IEEE International Symposium on. IEEE ; 2010 :836–839.
Bijari PB, Akhondi-Asl A, Soltanian-Zadeh H. Three-dimensional coupled-object segmentation using symmetry and tissue type information. Computerized Medical Imaging and Graphics. 2010;34 (3) :236–249.
Akhondi-Asl A, Soltanian-Zadeh H. Two-stage multishape segmentation of brain structures using image intensity, tissue type, and location information. Medical physics. 2010;37 :4501.
Mahmoudi SE, Akhondi-Asl A, Rahmani R, Faghih-Roohi S, Taimouri V, Sabouri A, Soltanian-Zadeh H. Web-based interactive 2D/3D medical image processing and visualization software. computer methods and programs in biomedicine. 2010;98 (2) :172–182.
2009
Hamidian H, Soltanian-Zadeh H, Akhondi-Asl A, Faraji-Dana R. Comparison of Linear and Nonlinear Models for Estimating Brain Deformation Using Finite Element Method. Advances in Computer Science and Engineering. 2009 :340–347.
Ray A, Akhondi-Asl A, Elisevich K, Soltanian-Zadeh H. Diffusion Tensor Imaging Of Parahippocampal Gyrus As A Lateralizing Tool In Intractable Temporal Lobe Epilepsy. Epilepsia. 2009;50 :74–75.

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