Publications

2014
Taimouri V, Akhondi-Asl A, Tomas-Fernandez X, Peters JM, Prabhu SP, Poduri A, Takeoka M, Loddenkemper T, Bergin AMR, Harini C, et al. Electrode localization for planning surgical resection of the epileptogenic zone in pediatric epilepsy. International journal of computer assisted radiology and surgery. 2014;9 (1) :91–105.
Nazem-Zadeh M-R, Schwalb JM, Elisevich KV, Bagher-Ebadian H, Hamidian H, Akhondi-Asl A-R, Jafari-Khouzani K, Soltanian-Zadeh H. Lateralization of temporal lobe epilepsy using a novel uncertainty analysis of MR diffusion in hippocampus, cingulum, and fornix, and hippocampal volume and FLAIR intensity. Journal of the neurological sciences. 2014;342 (1) :152–161.
Akhondi-Asl A, Hoyte L, Lockhart ME, Warfield SK. A logarithmic opinion pool based STAPLE algorithm for the fusion of segmentations with associated reliability weights. IEEE transactions on medical imaging. 2014;33 (10) :1997–2009.
Gorthi S, Akhondi-Asl A, Thiran J-P, Warfield SK. Optimal map parameters estimation in staple-learning from performance parameters versus image similarity information, in International Workshop on Machine Learning in Medical Imaging. Springer, Cham ; 2014 :174–181.
Fernandez IS, Akhondi-Asl A, Klehm J, Warfield S, Peters J, Loddenkemper T. Patients with Electrical Status Epilepticus in Sleep and Normal Magnetic Resonance Imaging Have Smaller Thalamic Volume Than Controls (P7. 332). Neurology. 2014;82 (10 Supplement) :P7–332.
Akhondi-Asl A, Afacan O, Mulkern RV, Warfield SK. T 2-Relaxometry for Myelin Water Fraction Extraction Using Wald Distribution and Extended Phase Graph, in International Conference on Medical Image Computing and Computer-Assisted Intervention. Springer, Cham ; 2014 :145–152.
Siversson C, Akhondi-Asl A, Bixby S, Kim Y-J, Warfield SK. Three-dimensional hip cartilage quality assessment of morphology and dGEMRIC by planar maps and automated segmentation. Osteoarthritis and cartilage. 2014;22 (10) :1511–1515.
2013
Scherrer B, Schwartzman A, Taquet M, Prabhu SP, Sahin M, Akhondi-Asl A, Warfield SK. Characterizing the distribution of anisotropic micro-structural environments with diffusion-weighted imaging (DIAMOND), in International Conference on Medical Image Computing and Computer-Assisted Intervention. Springer ; 2013 :518–526.
Siversson C, Akhondi-Asl A, Kim Y-J, Warfield SK. Planar hip cartilage quality maps—a novel approach to 3D cartilage assessment by combining dGEMRIC with automated segmentation. Proceedings of ISMRM 2013. 2013.
Scherrer B, Schwartzman A, Taquet M, Prabhu SP, Sahin M, Akhondi-Asl A, Warfield SK. Characterizing the distribution of anisotropic micro-structural environments with diffusion-weighted imaging (DIAMOND), in International Conference on Medical Image Computing and Computer-Assisted Intervention. Springer, Berlin, Heidelberg ; 2013 :518–526.
Scherrer B, Schwartzman A, Taquet M, Prabhu SP, Sahin M, Akhondi-Asl A, Warfield SK. Medical Image Computing and Computer-Assisted Intervention–MICCAI 2013. 2013.
Asman A, Akhondi-Asl A, Wang H, Tustison N, Avants B, Warfield SK, Landman B. Miccai 2013 segmentation algorithms, theory and applications (SATA) challenge results summary, in MICCAI Challenge Workshop on Segmentation: Algorithms, Theory and Applications (SATA). ; 2013.
Akhondi-Asl A, Warfield SK. Simultaneous truth and performance level estimation through fusion of probabilistic segmentations. Medical Imaging, IEEE Transactions on. 2013;32 (10) :1840–1852.
2012
Commowick O, Akhondi-Asl A, Warfield SK. Estimating a reference standard segmentation with spatially varying performance parameters: Local MAP STAPLE. IEEE transactions on medical imaging. 2012;31 (8) :1593–1606.
Akhondi-Asl A, Hans A, Scherrer B, Peters JM, Warfield SK. Whole brain group network analysis using network bias and variance parameters, in 2012 9th IEEE International Symposium on Biomedical Imaging (ISBI). IEEE ; 2012 :1511–1514.
Commowick O, Akhondi-Asl A, Warfield SK. Estimating a reference standard segmentation with spatially varying performance parameters: local MAP STAPLE. IEEE transactions on medical imaging. 2012;31 (8) :1593–1606.
Akhondi-Asl A, Warfield SK. Estimation of the prior distribution of ground truth in the STAPLE algorithm: an empirical bayesian approach, in International Conference on Medical Image Computing and Computer-Assisted Intervention. Springer, Berlin, Heidelberg ; 2012 :593–600.
Gholipour A, Akhondi-Asl A, Estroff JA, Warfield SK. Multi-atlas multi-shape segmentation of fetal brain MRI for volumetric and morphometric analysis of ventriculomegaly. NeuroImage. 2012;60 (3) :1819–1831.
Akhondi-Asl A, Hans A, Scherrer B, Peters JM, Warfield SK. Whole brain group network analysis using network bias and variance parameters, in Biomedical Imaging (ISBI), 2012 9th IEEE International Symposium on. IEEE ; 2012 :1511–1514.
2011
Akhondi-Asl A, Warfield SK. A tutorial introduction to STAPLE. Crl. med. harvard. edu. 2011.

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