Fabian Fröhlich, Thomas Kessler, Daniel Weindl, Alexey Shadrin, Leonard Schmiester, Hendrik Hache, Artur Muradyan, Moritz Schütte, Ji-Hyun Lim, Matthias Heinig, Fabian J Theis, Hans Lehrach, Christoph Wierling, Bodo Lange, and Jan Hasenauer. 2018. “
Efficient Parameter Estimation Enables the Prediction of Drug Response Using a Mechanistic Pan-Cancer Pathway Model.” Cell Systems, 7, 6, Pp. 567-579.
Publisher's Version
Froehlich_et_al_2018b.pdf Thomas S Ligon, Fabian Fröhlich, Oana T Chi, Julio R Banga, Eva Balsa-Canto, and Jan Hasenauer. 2018. “
GenSSI 2.0: Multi-experiment structural identifiability analysis of SBML models.” Bioinformatics, 34, 8, Pp. 1421-1423.
Publisher's Version
Ligon_et_al_2018.pdf Fabian Fröhlich, Anita Reiser, Laura Fink, Daniel Woschée, Thomas Ligon, Fabian J Theis, Joachim O Rädler, and Jan Hasenauer. 2018. “
Multi-experiment nonlinear mixed effect modeling of single-cell translation kinetics after transfection.” NPJ systems biology and applications, 5, 1, Pp. 42.
Publisher's Version
Froehlich_et_al_2018c.pdf Alejandro F Villaverde, Fabian Fröhlich, Daniel Weindl, Jan Hasenauer, and Julio R Banga. 2018. “
Benchmarking optimization methods for parameter estimation in large kinetic models.” Bioinformatics, 35, 5, Pp. 830-838.
Publisher's Version
Villaverde_et_al_2018.pdf Paul Stapor, Daniel Weindl, Benjamin Ballnus, Sabine Hug, Carolin Loos, Anna Fiedler, Sabrina Krause, Sabrina Hroß, Fabian Fröhlich, and Jan Hasenauer. 2018. “
PESTO: Parameter EStimation TOolbox.” Bioinformatics, 34, 4, Pp. 705-707.
Publisher's Version
Stapor_et_al_2018a.pdf