Publications by Year: 2016

2016
Garwood, R.J., et al., 2016. Carboniferous Onychophora from Montceau-les-Mines, France: Constraining the timing of onychophoran terrestrialization. Invertebrate Biology. untitled_text.txt
Combosch, D.J. & Giribet, G., 2016. Clarifying phylogenetic relationships and the evolutionary history of the bivalve order Arcida (Mollusca: Bivalvia: Pteriomorphia). Molecular Phylogenetics and Evolution , 94 , pp. 298-312.Abstract

The systematics of the bivalve order Arcida constitutes an unresolved conundrum in bivalve systematics. The current definition of Arcida encompasses two superfamilies: Limopsoidea, which includes the recent families Philobryidae and Limopsidae, and Arcoidea, which encompasses the families Arcidae, Cucullaeidae, Noetiidae, Glycymerididae and Parallelodontidae. This classification, however, is controversial particularly with respect to the position and taxonomic status of Glycymerididae. Previous molecular phylogenies were limited either by the use of only a single molecular marker or by including only a few limopsoid and glycymeridid taxa. The challenging nature of Arcida taxonomy and the controversial results of some of the previous studies, prompted us to use a broad range of taxa (55 species), three nuclear markers (18S rRNA, 28S rRNA and histone H3) and a wide range of algorithmic approaches. This broad but stringent approach led to a number of results that differ significantly from previous studies. We provide the first molecular evidence that supports the separation of Arcoidea from Limopsoidea, although the exact position of Glycymerididae remains unresolved, and the monophyly of Limopsoidea is algorithm-dependent. In addition, we present the first time-calibrated evolutionary tree of Arcida relationships, indicating a significant increase in the diversification of arcidan lineages at the beginning of the Cretaceous, around 140Ma. The monophyly of Arcida, which has been supported previously, was confirmed in all our analyses. Although relationships among families remain somehow unresolved we found support for the monophyly of most arcidan families, at least under some analytical conditions (i.e., Glycymerididae, Noetiidae, Philobryidae, and Limopsidae). However, Arcidae, and particularly Arcinae, remain a major source of inconsistency in the current system of Arcida classification and are in dire need of taxonomic revision.

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Fernández, R., Edgecombe, G.D. & Giribet, G., 2016. Exploring phylogenetic relationships within Myriapoda and the effects of matrix composition and occupancy on phylogenomic reconstruction. Systematic Biology. Publisher's Version untitled_text_01.txt
Harvey, M.S., et al., 2016. The first troglobitic species of Gymnobisiidae (Pseudoscorpiones : Neobisioidea), from Table Mountain (Western Cape Province, South Africa) and its phylogenetic position. Invertebrate Systematics , 30 , pp. 75-85. Publisher's Version untitled_text_05.txt
Sundberg, P., et al., 2016. The future of nemertean taxonomy (phylum Nemertea) — a proposal. Zoologica Scripta , 46. nemertean_taxonomy_rev1.docx
Giribet, G. & Kawauchi, G.Y., 2016. How many species of Siphonaria pectinata (Gastropoda: Heterobranchia) are there?. Journal of Molluscan Studies , pp. eyv038. untitled_text_07.txt
Giribet, G., Hormiga, G. & Edgecombe, G.D., 2016. The meaning of categorical ranks in evolutionary biology. Organisms Diversity & Evolution. untitled_text_02.txt
Lozano-Fernandez, J., et al., 2016. A molecular palaeobiological exploration of arthropod terrestrialisation. Philosophical Transactions of the Royal Society B: Biological Sciences. untitled_text_11.txt
Giribet, G., et al., 2016. A molecular phylogeny of the temperate Gondwanan family Pettalidae (Arachnida, Opiliones, Cyphophthalmi) with biogeographic and taxonomic implications. Zoological Journal of the Linnean Society. pettalidae_manuscript_v.6_clean.docx
Couto, D.R., et al., 2016. A multilocus molecular phylogeny of Fasciolariidae (Neogastropoda: Buccinoidea). Molecular Phylogenetics and Evolution , 99 , pp. 309-322. 2016-01-27_gg.doc
Carbayo, F., Francoy, T.M. & Giribet, G., 2016. Non-destructive imaging to describe a new species of Obama land planarian (Platyhelminthes, Tricladida). Zoologica Scripta. otavioi-description-13.docx
Selden, P.A., et al., 2016. The oldest armoured harvestman (Arachnida: Opiliones: Laniatores), from Upper Cretaceous Myanmar amber. Cretaceous Research. laniatoresmay2016_final.docx
Dunlop, J.A., Selden, P.A. & Giribet, G., 2016. Penis morphology in a Burmese amber harvestman. Science of Nature , 103 , pp. 11.Abstract

A unique specimen of the fossil harvestman Halitherses grimaldii Giribet and Dunlop, 2005 (Arachnida: Opiliones) from the Cretaceous (ca. 99 Ma) Burmese amber of Myanmar reveals a fully extended penis. This is the first record of a male copulatory organ of this nature preserved in amber and is of special importance due to the age of the deposit. The penis has a slender, distally flattened truncus, a spatulate heart-shaped glans and a short distal stylus, twisted at the tip. In living harvestmen, the penis yields crucial characters for their systematics. Male genital morphology in H. grimaldii appears to be unique among the wider Dyspnoi clade to which this fossil belongs. The large eyes in the fossil differ markedly from other members of the subfamily Ortholasmatinae to which H. grimaldii was originally referred. Based on recent data, it has been argued that large eyes may be plesiomorphic for Palpatores (i.e. the suborders Eupnoi and Dyspnoi), potentially rendering this character plesiomorphic for the fossil too. Thus, the unique structure of the penis seen here, and the probable lack of diaphanous teeth, present in all other extant non-acropsopilionid Dyspnoi, suggest that H. grimaldii represents a new, extinct family of large-eyed dyspnoid harvestmen, Halithersidae fam. nov.; a higher taxon in amber diagnosed here on both somatic and genital characters.

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Clouse, R.M., et al., 2016. Phylogeography of the harvestman genus Metasiro (Arthropoda, Arachnida, Opiliones) reveals a potential solution to the Pangean paradox. Organisms Diversity & Evolution , 16 , pp. 167-184. Publisher's Version untitled_text_06.txt
Dimitrov, D., et al., 2016. Rounding up the usual suspects: a standard target-gene approach for resolving the interfamilial phylogenetic relationships of ecribellate orb-weaving spiders with a new family-rank classification (Araneae, Araneoidea). Cladistics. dimitrov_et_al_manuscript_revised_final_r2.docx
Giribet, G., 2016. Vicariance biogeography. In R. M. Kliman, ed. The Encyclopedia of Evolutionary Biology. Oxford. Oxford: Academic Press, pp. 344-348. untitled_text_10.txt