Publications

2018
Stephen Morrell, Zbigniew Wojna, Can Son Khoo, Sebastien Ourselin, and Juan Eugenio Iglesias. 2018. “Large-scale mammography CAD with deformable conv-nets.” In Image Analysis for Moving Organ, Breast, and Thoracic Images, Pp. 64-72. Springer, Cham.
Sebastiano Ferraris, Johannes van der Merwe, Lennart Van Der Veeken, Ferran Prados, Juan-Eugenio Iglesias, Andrew Melbourne, Marco Lorenzi, Marc Modat, Willy Gsell, and Jan Deprest. 2018. “A magnetic resonance multi-atlas for the neonatal rabbit brain.” NeuroImage, 179, Pp. 187-198.
Juan Eugenio Iglesias, Marco Lorenzi, Sebastiano Ferraris, Loïc Peter, Marc Modat, Allison Stevens, Bruce Fischl, and Tom Vercauteren. 2018. “Model-based refinement of nonlinear registrations in 3D histology reconstruction.” International Conference on Medical Image Computing and Computer-Assisted Intervention. Springer, Cham.
Juan Eugenio Iglesias, Ricardo Insausti, Garikoitz Lerma-Usabiaga, Martina Bocchetta, Koen Van Leemput, Douglas N Greve, Andre van der Kouwe, Bruce Fischl, César Caballero-Gaudes, and Pedro M Paz-Alonso. 2018. “A probabilistic atlas of the human thalamic nuclei combining ex vivo MRI and histology.” Neuroimage, 183, Pp. 314-326.
Alessia Atzeni, Marnix Jansen, Sebastien Ourselin, and Juan Eugenio Iglesias. 2018. “A probabilistic model combining deep learning and multi-atlas segmentation for semi-automated labelling of histology.” International Conference on Medical Image Computing and Computer-Assisted Intervention. Springer, Cham.
Marcel Tella-Amo, Loic Peter, Dzhoshkun I Shakir, Jan Deprest, Danail Stoyanov, Juan E Iglesias, Tom Vercauteren, and Sebastien Ourselin. 2018. “Probabilistic visual and electromagnetic data fusion for robust drift-free sequential mosaicking: application to fetoscopy.” Journal of Medical Imaging, 5, 2, Pp. 021217.
Lyon W Chen, Delin Sun, Sarah L Davis, Courtney C Haswell, Emily L Dennis, Chelsea A Swanson, Christopher D Whelan, Boris Gutman, Neda Jahanshad, and Juan Eugenio Iglesias. 2018. “Smaller hippocampal CA1 subfield volume in posttraumatic stress disorder.” Depression and anxiety, 35, 11, Pp. 1018-1029.
Ignacio Arganda-Carreras, Tudor Manoliu, Nicolas Mazuras, Florian Schulze, Juan E Iglesias, Katja Bühler, Arnim Jenett, François Rouyer, and Philippe Andrey. 2018. “A statistically representative atlas for mapping neuronal circuits in the drosophila adult brain.” Frontiers in neuroinformatics, 12, Pp. 13.
Jonas Pichat, Juan Eugenio Iglesias, Tarek Yousry, Sébastien Ourselin, and Marc Modat. 2018. “A survey of methods for 3D histology reconstruction.” Medical image analysis, 46, Pp. 73-105.
Susanne G Mueller, Paul A Yushkevich, Sandhitsu Das, Lei Wang, Koen Van Leemput, Juan Eugenio Iglesias, Kate Alpert, Adam Mezher, Peter Ng, and Katrina Paz. 2018. “Systematic comparison of different techniques to measure hippocampal subfield volumes in ADNI2.” NeuroImage: Clinical, 17, Pp. 1006-1018.
2017
L Zollei, Yangming Ou, Juan Iglesias, Ellen P Grant, and Bruce Fischl. 2017. “FreeSurfer image processing pipeline for infant clinical MRI images.” Proceedings of the Organization for Human Brain Mapping Conference 1703.
Juan Eugenio Iglesias. 2017. “Globally optimal coupled surfaces for semi-automatic segmentation of medical images.” International Conference on Information Processing in Medical Imaging. Springer, Cham.
Zeynep M Saygin, Dorit Kliemann, Juan Eugenio Iglesias, André JW van der Kouwe, Ellen Boyd, Martin Reuter, Allison Stevens, Koenraad Van Leemput, Alexis McKee, and Matthew P Frosch. 2017. “High-resolution magnetic resonance imaging reveals nuclei of the human amygdala: manual segmentation to automatic atlas.” Neuroimage, 155, Pp. 370-382.
Iman Aganj, Juan Eugenio Iglesias, Martin Reuter, Mert Rory Sabuncu, and Bruce Fischl. 2017. “Mid-space-independent deformable image registration.” NeuroImage, 152, Pp. 158-170.
Marzia Antonella Scelsi, Eugenio Iglesias, Jonathan M Schott, Sebastien Ourselin, Andre Altmann, and ADNI Investigators. 2017. “[P2–409]: THE ROLE OF HIPPOCAMPAL SUBFIELDS IN THE ATROPHY PROCESS IN ALZHEIMER's DISEASE: AN IN‐VIVO STUDY OF THE ADNI COHORT.” Alzheimer's & Dementia, 13, 7S_Part_16, Pp. P788-P789.
Jonas Pichat, Eugenio Iglesias, Sotiris Nousias, Tarek Yousry, Sébastien Ourselin, and Marc Modat. 2017. “Part-to-whole Registration of Histology and MRI using Shape Elements.” Proceedings of the IEEE International Conference on Computer Vision Workshops.
New Fei Ho, Juan Eugenio Iglesias, Min Yi Sum, Carissa Nadia Kuswanto, Yih Yian Sitoh, Joshua De Souza, Zhaoping Hong, Bruce Fischl, Joshua L Roffman, and Juan Zhou. 2017. “Progression from selective to general involvement of hippocampal subfields in schizophrenia.” Molecular psychiatry, 22, 1, Pp. 142-152.
New Fei Ho, Daphne J Holt, Mike Cheung, Juan Eugenio Iglesias, Alex Goh, Mingyuan Wang, Joseph KW Lim, Joshua De Souza, Joann S Poh, and Yuen Mei See. 2017. “Progressive decline in hippocampal CA1 volume in individuals at ultra-high-risk for psychosis who do not remit: findings from the longitudinal youth at risk study.” Neuropsychopharmacology, 42, 6, Pp. 1361-1370.
Juan Eugenio Iglesias, Garikoitz Lerma-Usabiaga, Luis C Garcia-Peraza-Herrera, Sara Martinez, and Pedro M Paz-Alonso. 2017. “Retrospective head motion estimation in structural brain MRI with 3D CNNs.” International Conference on Medical Image Computing and Computer-Assisted Intervention. Springer, Cham.
Pavitra Krishnaswamy, Gabriel Obregon-Henao, Jyrki Ahveninen, Sheraz Khan, Behtash Babadi, Juan Eugenio Iglesias, Matti S Hämäläinen, and Patrick L Purdon. 2017. “Sparsity enables estimation of both subcortical and cortical activity from MEG and EEG.” Proceedings of the National Academy of Sciences, 114, 48, Pp. E10465-E10474.

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