Publications

2013
Cheng-Yi Liu, Juan Eugenio Iglesias, Zhuowen Tu, and Alzheimer’s Disease Neuroimaging Initiative. 2013. “Deformable templates guided discriminative models for robust 3D brain MRI segmentation.” Neuroinformatics, 11, 4, Pp. 447-468.
Albert Montillo, Jilin Tu, Jamie Shotton, John Winn, Juan Eugenio Iglesias, Dimitris N Metaxas, and Antonio Criminisi. 2013. “Entanglement and differentiable information gain maximization.” In Decision forests for computer vision and medical image analysis, Pp. 273-293. Springer, London.
Oula Puonti, Juan Eugenio Iglesias, and Koen Van Leemput. 2013. “Fast, sequence adaptive parcellation of brain MR using parametric models.” International Conference on Medical Image Computing and Computer-Assisted Intervention. Springer, Berlin, Heidelberg.
Susanne Mueller, Paul Yushkevich, Lei Wang, Koen Van Leemput, Adam Mezher, Juan Eugenio Iglesias, Sandhitsu Das, and Michael Weiner. 2013. “IC‐P‐088: Collaboration for a systematic comparison of different techniques to measure subfield volumes: Announcement and first results.” Alzheimer's & Dementia, 9, Pp. P51-P51.
Juan Eugenio Iglesias, Mert Rory Sabuncu, Koen Van Leemput, and Alzheimer’s Disease Neuroimaging Initiative. 2013. “Improved inference in Bayesian segmentation using Monte Carlo sampling: Application to hippocampal subfield volumetry.” Medical image analysis, 17, 7, Pp. 766-778.
Juan Eugenio Iglesias, Mert Rory Sabuncu, and Koen Van Leemput. 2013. “A probabilistic, non-parametric framework for inter-modality label fusion.” International Conference on Medical Image Computing and Computer-Assisted Intervention. Springer, Berlin, Heidelberg.
Juan Eugenio Iglesias, Ender Konukoglu, Darko Zikic, Ben Glocker, Koen Van Leemput, and Bruce Fischl. 2013. “Is synthesizing MRI contrast useful for inter-modality analysis?” International Conference on Medical Image Computing and Computer-Assisted Intervention. Springer, Berlin, Heidelberg.
Juan Eugenio Iglesias, Mert Rory Sabuncu, and Koen Van Leemput. 2013. “A unified framework for cross-modality multi-atlas segmentation of brain MRI.” Medical image analysis, 17, 8, Pp. 1181-1191.
2012
Juan Eugenio Iglesias, Paul M Thompson, Cheng-Yi Liu, and Zhuowen Tu. 2012. “Fast approximate stochastic tractography.” Neuroinformatics, 10, 1, Pp. 5-17.
Juan Eugenio Iglesias, Mert Rory Sabuncu, and Koen Van Leemput. 2012. “A generative model for multi-atlas segmentation across modalities.” 2012 9th IEEE International Symposium on Biomedical Imaging (ISBI). IEEE.
Juan Eugenio Iglesias, Mert Rory Sabuncu, and Koen Van Leemput. 2012. “A generative model for probabilistic label fusion of multimodal data.” International Workshop on Multimodal Brain Image Analysis. Springer, Berlin, Heidelberg.
Juan Eugenio Iglesias, Mert Rory Sabuncu, and Koen Van Leemput. 2012. “Incorporating parameter uncertainty in bayesian segmentation models: Application to hippocampal subfield volumetry.” International Conference on Medical Image Computing and Computer-Assisted Intervention. Springer, Berlin, Heidelberg.
Cheng-Yi Liu, Juan Eugenio Iglesias, and Zhuowen Tu. 2012. “Pictorial multi-atlas segmentation of brain MRI.” 2012 IEEE Workshop on Mathematical Methods in Biomedical Image Analysis. IEEE.
2011
Juan Eugenio Iglesias, Jiayan Jiang, Cheng-Yi Liu, Zhuowen Tu, and Alzheimers Disease Neuroimaging Initiative. 2011. “Classification of Alzheimer’s disease using a self-smoothing operator.” International Conference on Medical Image Computing and Computer-Assisted Intervention. Springer, Berlin, Heidelberg.
Juan Eugenio Iglesias, Ender Konukoglu, Albert Montillo, Zhuowen Tu, and Antonio Criminisi. 2011. “Combining generative and discriminative models for semantic segmentation of CT scans via active learning.” Biennial International Conference on Information Processing in Medical Imaging. Springer, Berlin, Heidelberg.
Albert Montillo, Jamie Shotton, John Winn, Juan Eugenio Iglesias, Dimitri Metaxas, and Antonio Criminisi. 2011. “Entangled decision forests and their application for semantic segmentation of CT images.” Biennial International Conference on Information Processing in Medical Imaging. Springer, Berlin, Heidelberg.
Juan Eugenio Iglesias Gonzalez, Paul M Thompson, Aishan Zhao, and Zhuowen Tu. 2011. “Modeling diffusion‐weighted MRI as a spatially variant Gaussian mixture: Application to image denoising.” Medical physics, 38, 7, Pp. 4350-4364.
Juan Eugenio Iglesias, Cheng-Yi Liu, Paul M Thompson, and Zhuowen Tu. 2011. “Robust brain extraction across datasets and comparison with publicly available methods.” IEEE transactions on medical imaging, 30, 9, Pp. 1617-1634.
William Speier, Juan E Iglesias, Leila El-Kara, Zhuowen Tu, and Corey Arnold. 2011. “Robust skull stripping of clinical glioblastoma multiforme data.” International Conference on Medical Image Computing and Computer-Assisted Intervention. Springer, Berlin, Heidelberg.
2010
Juan Eugenio Iglesias, Cheng-Yi Liu, Paul Thompson, and Zhuowen Tu. 2010. “Agreement-based semi-supervised learning for skull stripping.” International Conference on Medical Image Computing and Computer-Assisted Intervention. Springer, Berlin, Heidelberg.

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