Publications

2016
Schultz T, Nedjati-Gilani G, Venkataraman A, Donnell LO, Panagiotaki E. Computational Diffusion MRI and Brain Connectivity. 2016;
Zhang F, Savadjiev P, Cai W, Song Y, Verma R, Westin C-F, O'Donnell LJ. Fiber clustering based white matter connectivity analysis for prediction of Autism Spectrum Disorder using diffusion tensor imaging. In: Biomedical Imaging (ISBI), 2016 IEEE 13th International Symposium on. IEEE; 2016 p. 564–567.
Westin C-F, Knutsson H, Pasternak O, Szczepankiewicz F, Özarslan E, van Westen D, Mattisson C, Bogren M, O'Donnell LJ, Kubicki M, others. Q-space trajectory imaging for multidimensional diffusion MRI of the human brain. Neuroimage 2016;135:345–362.
Kapur T, Pieper S, Fedorov A, Fillion-Robin JC, Halle M, O'donnell L, Lasso A, Ungi T, Pinter C, Finet J, others. Increasing the impact of medical image computing using community-based open-access hackathons: The NA-MIC and 3D Slicer experience. 2016;
Fakhri M, O’Donnell LJ, Rigolo L, Golby AJ. Mapping Eloquent Brain with Functional MRI and DTI. In: Functional Mapping of the Cerebral Cortex. Springer International Publishing; 2016 p. 41–62.
Fischer DB, Perez DL, Prasad S, Rigolo L, O’Donnell L, Acar D, Meadows M-E, Baslet G, Boes AD, Golby AJ, others. Right inferior longitudinal fasciculus lesions disrupt visual-emotional integration. Social cognitive and affective neuroscience 2016;11(6):945–951.
Chen Z, Tie Y, Olubiyi O, Zhang F, Mehrtash A, Rigolo L, Kahali P, Norton I, Pasternak O, Rathi Y, Golby AJ, O’Donnell LJ. Corticospinal tract modeling for neurosurgical planning by tracking through regions of peritumoral edema and crossing fibers using two-tensor unscented Kalman filter tractography. International journal of computer assisted radiology and surgery 2016;:1–12.
2015
O’Donnell LJ, Schultz T. Statistical and machine learning methods for neuroimaging: examples, challenges, and extensions to diffusion imaging data. In: Visualization and Processing of Higher Order Descriptors for Multi-Valued Data. Springer, Cham; 2015 p. 299–319.
O'Donnell LJ, Pasternak O. Does diffusion MRI tell us anything about the white matter? An overview of methods and pitfalls. Schizophrenia research 2015;161(1):133–141.
Lyall AE, Savadjiev P, del Re E, O'donnell L, Seidman LJ, Goldstein J, Mesholam-Gately R, Petryshen T, Wojcik J, McCarley RW, others. EXPLORING THE RELATIONSHIP OF GRAY AND WHITE MATTER STRUCTURAL PATHOLOGY IN FIRST-EPISODE SCHIZOPHRENIA THROUGH MUTUAL INFORMATION. In: SCHIZOPHRENIA BULLETIN. OXFORD UNIV PRESS GREAT CLARENDON ST, OXFORD OX2 6DP, ENGLAND; 2015 p. S264–S264.
Chen Z, Tie Y, Olubiyi O, Rigolo L, Mehrtash A, Norton I, Pasternak O, Rathi Y, Golby AJ, O'Donnell LJ. Reconstruction of the arcuate fasciculus for surgical planning in the setting of peritumoral edema using two-tensor unscented Kalman filter tractography. NeuroImage: Clinical 2015;7:815–822.
Ning L, Laun F, Gur Y, DiBella EVR, Deslauriers-Gauthier S, Megherbi T, Ghosh A, Zucchelli M, Menegaz G, Fick R, others. Sparse Reconstruction Challenge for diffusion MRI: Validation on a physical phantom to determine which acquisition scheme and analysis method to use?. Medical image analysis 2015;26(1):316–331.
O’Donnell LJ, Schultz T. Statistical and machine learning methods for neuroimaging: examples, challenges, and extensions to diffusion imaging data. In: Visualization and Processing of Higher Order Descriptors for Multi-Valued Data. Springer International Publishing; 2015 p. 299–319.
Ning L, Laun F, Gur Y, DiBella EVR, Deslauriers-Gauthier S, Megherbi T, Ghosh A, Zucchelli M, Menegaz G, Fick R, St-Jean S, Paquette M, Aranda R, Descoteaux M, Deriche R, O’Donnell L, Rathi Y. Sparse Reconstruction Challenge for diffusion MRI: Validation on a physical phantom to determine which acquisition scheme and analysis method to use?. Medical image analysis 2015;26:316–331.
O'Donnell LJ, Pasternak O. Does diffusion MRI tell us anything about the white matter? An overview of methods and pitfalls. Schizophrenia research 2015;161:133–141.
Chen Z, Tie Y, Olubiyi O, Rigolo L, Mehrtash A, Norton I, Pasternak O, Rathi Y, Golby AJ, O'Donnell LJ. Reconstruction of the arcuate fasciculus for surgical planning in the setting of peritumoral edema using two-tensor unscented Kalman filter tractography. NeuroImage: Clinical 2015;7:815–822.
2014
Schultz G, Nedjati-Gilani G, Venkataraman A, O'donnell L, Panagiotaki E. Computational diffusion MRI and brain connectivity. 2014;
Schultz T, Nedjati-Gilani GL, Venkataraman A, O'Donnell L, Panagiotaki E. Computational Diffusion MRI and Brain Connectivity, MICCAI Workshops CDMRI/MMBC, Nagoya, Japan, September 22nd, 2013. In: CDMRI/MMBC@ MICCAI. Springer; 2014
O'donnell L, Nedjati-Gilani G, Rathi Y, Reisert M, Schneider T. Computational Diffusion MRI: MICCAI Workshop, Boston, MA, USA, September 2014. 2014;
Chen Z, Tie Y, O'donnell L, Rigolo L, Mehrtash A, Olubiyi O, Norton I, Pasternak O, Rathi Y, Golby A. Resolving the Challenges of Peritumoral Edema in Tracing Arcuate Fasciculus for Surgical Planning Using Two-Tensor Unscented Kalman Filter Tractography. In: Neuro-Oncology (in Abstracts from the 19th Annual Scientific Meeting of the Society for Neuro-Oncology, Miami, Florida, November 13-16, 2014). Oxford University Press; 2014 p. v140–v140.

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